Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.24■□□□□ 0.03
UBCP0CG48 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.24■□□□□ 0.03
UBCP0CG48 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.24■□□□□ 0.03
UBCP0CG48 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
UBCP0CG48 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 AC106886.4-201ENST00000623557 2502 ntBASIC15.24■□□□□ 0.03
UBCP0CG48 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.24■□□□□ 0.03
UBCP0CG48 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
UBCP0CG48 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
UBCP0CG48 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBCP0CG48 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.23■□□□□ 0.03
UBCP0CG48 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBCP0CG48 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.23■□□□□ 0.03
UBCP0CG48 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.23■□□□□ 0.03
UBCP0CG48 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
UBCP0CG48 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
UBCP0CG48 AC117947.1-201ENST00000427448 529 ntBASIC15.23■□□□□ 0.03
UBCP0CG48 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.23■□□□□ 0.03
UBCP0CG48 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.23■□□□□ 0.03
UBCP0CG48 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UBCP0CG48 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.23■□□□□ 0.03
UBCP0CG48 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.23■□□□□ 0.03
UBCP0CG48 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
UBCP0CG48 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
UBCP0CG48 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
UBCP0CG48 AC010460.3-201ENST00000511359 1579 ntBASIC15.23■□□□□ 0.03
UBCP0CG48 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.23■□□□□ 0.03
UBCP0CG48 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
UBCP0CG48 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBCP0CG48 PCDHB19P-201ENST00000570871 2371 ntBASIC15.22■□□□□ 0.03
UBCP0CG48 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.22■□□□□ 0.03
UBCP0CG48 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.22■□□□□ 0.03
UBCP0CG48 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.22■□□□□ 0.03
UBCP0CG48 PCDH8P1-201ENST00000428983 2773 ntBASIC15.22■□□□□ 0.03
UBCP0CG48 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.22■□□□□ 0.03
UBCP0CG48 Z83836.1-201ENST00000624605 1642 ntBASIC15.22■□□□□ 0.03
UBCP0CG48 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 RNF152P1-201ENST00000397754 604 ntBASIC15.22■□□□□ 0.03
UBCP0CG48 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.22■□□□□ 0.03
UBCP0CG48 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.22■□□□□ 0.03
UBCP0CG48 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBCP0CG48 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UBCP0CG48 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
UBCP0CG48 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
UBCP0CG48 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBCP0CG48 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms