Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.81■□□□□ 0.92
APPP05067 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.81■□□□□ 0.92
APPP05067 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.81■□□□□ 0.92
APPP05067 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.81■□□□□ 0.92
APPP05067 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.81■□□□□ 0.92
APPP05067 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
APPP05067 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.81■□□□□ 0.92
APPP05067 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
APPP05067 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.81■□□□□ 0.92
APPP05067 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.81■□□□□ 0.92
APPP05067 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
APPP05067 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.81■□□□□ 0.92
APPP05067 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.8■□□□□ 0.92
APPP05067 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.8■□□□□ 0.92
APPP05067 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.8■□□□□ 0.92
APPP05067 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.8■□□□□ 0.92
APPP05067 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.8■□□□□ 0.92
APPP05067 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.8■□□□□ 0.92
APPP05067 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.8■□□□□ 0.92
APPP05067 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.8■□□□□ 0.92
APPP05067 AL049840.3-201ENST00000602669 611 ntBASIC20.8■□□□□ 0.92
APPP05067 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.8■□□□□ 0.92
APPP05067 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.8■□□□□ 0.92
APPP05067 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
APPP05067 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.8■□□□□ 0.92
APPP05067 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APPP05067 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.8■□□□□ 0.92
APPP05067 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.8■□□□□ 0.92
APPP05067 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.79■□□□□ 0.92
APPP05067 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.79■□□□□ 0.92
APPP05067 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.79■□□□□ 0.92
APPP05067 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.79■□□□□ 0.92
APPP05067 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.79■□□□□ 0.92
APPP05067 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.79■□□□□ 0.92
APPP05067 AC093909.1-201ENST00000504731 1122 ntBASIC20.79■□□□□ 0.92
APPP05067 LINC00896-202ENST00000609602 2128 ntBASIC20.79■□□□□ 0.92
APPP05067 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
APPP05067 FAM215A-202ENST00000632077 792 ntBASIC20.79■□□□□ 0.92
APPP05067 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.79■□□□□ 0.92
APPP05067 OR6D1P-203ENST00000641209 4860 ntBASIC20.79■□□□□ 0.92
APPP05067 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.79■□□□□ 0.92
APPP05067 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.79■□□□□ 0.92
APPP05067 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
APPP05067 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APPP05067 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.78■□□□□ 0.92
APPP05067 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.78■□□□□ 0.92
APPP05067 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
APPP05067 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 AL135999.2-201ENST00000622438 1686 ntBASIC20.78■□□□□ 0.92
APPP05067 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.78■□□□□ 0.92
APPP05067 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.78■□□□□ 0.92
APPP05067 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APPP05067 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.78■□□□□ 0.92
APPP05067 AC139887.3-201ENST00000568585 713 ntBASIC20.78■□□□□ 0.92
APPP05067 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms