Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 FAAHP1-202ENST00000446499 1238 ntBASIC18.62■□□□□ 0.57
HLA-DRAP01903 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DRAP01903 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 EGFEM1P-202ENST00000431685 1563 ntBASIC18.61■□□□□ 0.57
HLA-DRAP01903 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 NCF1C-201ENST00000438382 1427 ntBASIC18.61■□□□□ 0.57
HLA-DRAP01903 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 FAM197Y8-203ENST00000450145 560 ntBASIC18.61■□□□□ 0.57
HLA-DRAP01903 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 AC104692.2-201ENST00000603054 253 ntBASIC18.61■□□□□ 0.57
HLA-DRAP01903 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HLA-DRAP01903 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRAP01903 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 RNPS1P1-201ENST00000507437 918 ntBASIC18.6■□□□□ 0.57
HLA-DRAP01903 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.6■□□□□ 0.57
HLA-DRAP01903 AL353135.1-201ENST00000606729 504 ntBASIC18.6■□□□□ 0.57
HLA-DRAP01903 AL589182.2-201ENST00000619332 1049 ntBASIC18.6■□□□□ 0.57
HLA-DRAP01903 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 LINC02012-201ENST00000608206 1725 ntBASIC18.6■□□□□ 0.57
HLA-DRAP01903 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HLA-DRAP01903 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRAP01903 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
HLA-DRAP01903 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms