Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
GGPS1O95749 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.42■□□□□ 0.7
GGPS1O95749 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
GGPS1O95749 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.42■□□□□ 0.7
GGPS1O95749 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GGPS1O95749 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
GGPS1O95749 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GGPS1O95749 AC067852.2-201ENST00000590513 2313 ntBASIC19.41■□□□□ 0.7
GGPS1O95749 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.41■□□□□ 0.7
GGPS1O95749 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.41■□□□□ 0.7
GGPS1O95749 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.41■□□□□ 0.7
GGPS1O95749 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GGPS1O95749 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GGPS1O95749 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.41■□□□□ 0.7
GGPS1O95749 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.41■□□□□ 0.7
GGPS1O95749 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
GGPS1O95749 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.41■□□□□ 0.7
GGPS1O95749 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.41■□□□□ 0.7
GGPS1O95749 AC096734.2-201ENST00000562054 433 ntBASIC19.41■□□□□ 0.7
GGPS1O95749 AC004877.2-201ENST00000623941 599 ntBASIC19.41■□□□□ 0.7
GGPS1O95749 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.41■□□□□ 0.7
GGPS1O95749 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
GGPS1O95749 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GGPS1O95749 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.41■□□□□ 0.7
GGPS1O95749 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.41■□□□□ 0.7
GGPS1O95749 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GGPS1O95749 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GGPS1O95749 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
GGPS1O95749 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
GGPS1O95749 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.4■□□□□ 0.7
GGPS1O95749 AC138932.1-201ENST00000534164 6830 ntBASIC19.4■□□□□ 0.7
GGPS1O95749 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GGPS1O95749 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GGPS1O95749 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
GGPS1O95749 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 AC211486.1-202ENST00000416371 468 ntBASIC19.4■□□□□ 0.7
GGPS1O95749 AC211476.1-201ENST00000503899 468 ntBASIC19.4■□□□□ 0.7
GGPS1O95749 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.4■□□□□ 0.7
GGPS1O95749 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.4■□□□□ 0.7
GGPS1O95749 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
GGPS1O95749 AC005829.1-201ENST00000570002 483 ntBASIC19.4■□□□□ 0.7
GGPS1O95749 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.4■□□□□ 0.7
GGPS1O95749 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 AC079781.4-201ENST00000641908 219 ntBASIC19.4■□□□□ 0.7
GGPS1O95749 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.4■□□□□ 0.7
GGPS1O95749 BCAR1-209ENST00000546196 1340 ntBASIC19.4■□□□□ 0.7
GGPS1O95749 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
GGPS1O95749 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
GGPS1O95749 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.4■□□□□ 0.7
GGPS1O95749 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GGPS1O95749 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GGPS1O95749 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.39■□□□□ 0.7
GGPS1O95749 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.39■□□□□ 0.7
GGPS1O95749 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
GGPS1O95749 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.39■□□□□ 0.69
GGPS1O95749 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GGPS1O95749 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GGPS1O95749 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GGPS1O95749 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.39■□□□□ 0.69
GGPS1O95749 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.39■□□□□ 0.69
GGPS1O95749 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.39■□□□□ 0.69
GGPS1O95749 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.39■□□□□ 0.69
GGPS1O95749 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.39■□□□□ 0.69
GGPS1O95749 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.39■□□□□ 0.69
GGPS1O95749 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.39■□□□□ 0.69
GGPS1O95749 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.39■□□□□ 0.69
GGPS1O95749 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
GGPS1O95749 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.39■□□□□ 0.69
GGPS1O95749 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.39■□□□□ 0.69
GGPS1O95749 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms