Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SUPT3HO75486 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.23■□□□□ 0.35
SUPT3HO75486 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.23■□□□□ 0.35
SUPT3HO75486 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 AC016396.2-201ENST00000562575 1417 ntBASIC17.23■□□□□ 0.35
SUPT3HO75486 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SUPT3HO75486 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SUPT3HO75486 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SUPT3HO75486 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 TMPOP1-202ENST00000424642 1267 ntBASIC17.23■□□□□ 0.35
SUPT3HO75486 AL139327.4-201ENST00000612362 153 ntBASIC17.23■□□□□ 0.35
SUPT3HO75486 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.23■□□□□ 0.35
SUPT3HO75486 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SUPT3HO75486 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SUPT3HO75486 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.23■□□□□ 0.35
SUPT3HO75486 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.23■□□□□ 0.35
SUPT3HO75486 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.23■□□□□ 0.35
SUPT3HO75486 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUPT3HO75486 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
SUPT3HO75486 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.22■□□□□ 0.35
SUPT3HO75486 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.22■□□□□ 0.35
SUPT3HO75486 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.22■□□□□ 0.35
SUPT3HO75486 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.22■□□□□ 0.35
SUPT3HO75486 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.22■□□□□ 0.35
SUPT3HO75486 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.22■□□□□ 0.35
SUPT3HO75486 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.22■□□□□ 0.35
SUPT3HO75486 AC002558.1-201ENST00000488906 803 ntBASIC17.22■□□□□ 0.35
SUPT3HO75486 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SUPT3HO75486 AC124864.1-201ENST00000623408 392 ntBASIC17.22■□□□□ 0.35
SUPT3HO75486 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.22■□□□□ 0.35
SUPT3HO75486 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.22■□□□□ 0.35
SUPT3HO75486 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.22■□□□□ 0.35
SUPT3HO75486 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SUPT3HO75486 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUPT3HO75486 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.21■□□□□ 0.35
SUPT3HO75486 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.21■□□□□ 0.35
SUPT3HO75486 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SUPT3HO75486 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.21■□□□□ 0.35
SUPT3HO75486 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.21■□□□□ 0.35
SUPT3HO75486 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SUPT3HO75486 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.21■□□□□ 0.35
SUPT3HO75486 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SUPT3HO75486 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.21■□□□□ 0.35
SUPT3HO75486 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 COX5BP2-201ENST00000392354 334 ntBASIC17.21■□□□□ 0.35
SUPT3HO75486 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.21■□□□□ 0.35
SUPT3HO75486 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
SUPT3HO75486 AL592071.1-201ENST00000611956 408 ntBASIC17.21■□□□□ 0.35
SUPT3HO75486 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.21■□□□□ 0.35
SUPT3HO75486 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUPT3HO75486 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.21■□□□□ 0.35
SUPT3HO75486 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.21■□□□□ 0.34
SUPT3HO75486 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SUPT3HO75486 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms