Protein–RNA interactions for Protein: O75452

RDH16, Retinol dehydrogenase 16, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16O75452 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RDH16O75452 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RDH16O75452 PP12613-201ENST00000424958 2230 ntBASIC16.4■□□□□ 0.22
RDH16O75452 RPS2P28-201ENST00000314255 741 ntBASIC16.4■□□□□ 0.22
RDH16O75452 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.4■□□□□ 0.22
RDH16O75452 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.4■□□□□ 0.22
RDH16O75452 LINC00982-205ENST00000420957 435 ntBASIC16.4■□□□□ 0.22
RDH16O75452 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.4■□□□□ 0.22
RDH16O75452 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.4■□□□□ 0.22
RDH16O75452 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.4■□□□□ 0.22
RDH16O75452 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.4■□□□□ 0.22
RDH16O75452 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.4■□□□□ 0.22
RDH16O75452 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RDH16O75452 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RDH16O75452 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.4■□□□□ 0.22
RDH16O75452 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.4■□□□□ 0.22
RDH16O75452 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RDH16O75452 AC008735.5-201ENST00000623544 497 ntBASIC16.4■□□□□ 0.22
RDH16O75452 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RDH16O75452 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RDH16O75452 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.4■□□□□ 0.22
RDH16O75452 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.4■□□□□ 0.22
RDH16O75452 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.4■□□□□ 0.22
RDH16O75452 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RDH16O75452 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.4■□□□□ 0.22
RDH16O75452 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.4■□□□□ 0.22
RDH16O75452 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
RDH16O75452 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
RDH16O75452 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RDH16O75452 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.39■□□□□ 0.21
RDH16O75452 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RDH16O75452 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RDH16O75452 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.39■□□□□ 0.21
RDH16O75452 AC093909.1-201ENST00000504731 1122 ntBASIC16.39■□□□□ 0.21
RDH16O75452 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.39■□□□□ 0.21
RDH16O75452 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RDH16O75452 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH16O75452 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH16O75452 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.39■□□□□ 0.21
RDH16O75452 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH16O75452 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH16O75452 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH16O75452 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.39■□□□□ 0.21
RDH16O75452 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.39■□□□□ 0.21
RDH16O75452 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH16O75452 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.39■□□□□ 0.21
RDH16O75452 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH16O75452 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH16O75452 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RDH16O75452 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.39■□□□□ 0.21
RDH16O75452 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.39■□□□□ 0.21
RDH16O75452 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RDH16O75452 CROCCP2-202ENST00000412962 2773 ntBASIC16.38■□□□□ 0.21
RDH16O75452 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH16O75452 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH16O75452 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH16O75452 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RDH16O75452 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH16O75452 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RDH16O75452 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.38■□□□□ 0.21
RDH16O75452 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
RDH16O75452 AP002414.3-201ENST00000589352 1468 ntBASIC16.38■□□□□ 0.21
RDH16O75452 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RDH16O75452 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH16O75452 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.38■□□□□ 0.21
RDH16O75452 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH16O75452 ELK2BP-201ENST00000415014 1224 ntBASIC16.38■□□□□ 0.21
RDH16O75452 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RDH16O75452 AC006557.2-201ENST00000592985 1240 ntBASIC16.38■□□□□ 0.21
RDH16O75452 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RDH16O75452 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms