Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC7.63□□□□□ -1.19
USH2AO75445 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC7.63□□□□□ -1.19
USH2AO75445 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC7.63□□□□□ -1.19
USH2AO75445 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USH2AO75445 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USH2AO75445 ZNF890P-202ENST00000530367 1156 ntBASIC7.63□□□□□ -1.19
USH2AO75445 MMP17-203ENST00000535004 719 ntTSL 3 BASIC7.63□□□□□ -1.19
USH2AO75445 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
USH2AO75445 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC7.63□□□□□ -1.19
USH2AO75445 AC027307.2-201ENST00000591252 911 ntBASIC7.63□□□□□ -1.19
USH2AO75445 SLC7A15P-201ENST00000424028 1363 ntBASIC7.63□□□□□ -1.19
USH2AO75445 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USH2AO75445 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USH2AO75445 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USH2AO75445 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC7.63□□□□□ -1.19
USH2AO75445 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
USH2AO75445 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
USH2AO75445 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
USH2AO75445 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
USH2AO75445 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
USH2AO75445 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC7.63□□□□□ -1.19
USH2AO75445 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC7.63□□□□□ -1.19
USH2AO75445 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
USH2AO75445 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC7.63□□□□□ -1.19
USH2AO75445 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
USH2AO75445 AL645728.2-201ENST00000641974 660 ntBASIC7.63□□□□□ -1.19
USH2AO75445 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
USH2AO75445 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC7.62□□□□□ -1.19
USH2AO75445 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC7.62□□□□□ -1.19
USH2AO75445 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC7.62□□□□□ -1.19
USH2AO75445 RARRES2P9-201ENST00000565168 469 ntBASIC7.62□□□□□ -1.19
USH2AO75445 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
USH2AO75445 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
USH2AO75445 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC7.62□□□□□ -1.19
USH2AO75445 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC7.62□□□□□ -1.19
USH2AO75445 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC7.62□□□□□ -1.19
USH2AO75445 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC7.62□□□□□ -1.19
USH2AO75445 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 ESPNP-201ENST00000270691 2015 ntBASIC7.62□□□□□ -1.19
USH2AO75445 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC7.62□□□□□ -1.19
USH2AO75445 AC108725.1-201ENST00000495472 409 ntBASIC7.62□□□□□ -1.19
USH2AO75445 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 AC015936.2-201ENST00000593177 259 ntBASIC7.62□□□□□ -1.19
USH2AO75445 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC7.62□□□□□ -1.19
USH2AO75445 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC7.62□□□□□ -1.19
USH2AO75445 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 SPDYE19P-201ENST00000338590 713 ntBASIC7.62□□□□□ -1.19
USH2AO75445 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC7.62□□□□□ -1.19
USH2AO75445 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC7.62□□□□□ -1.19
USH2AO75445 DOC2GP-202ENST00000514950 1163 ntBASIC7.62□□□□□ -1.19
USH2AO75445 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC7.62□□□□□ -1.19
USH2AO75445 HNRNPUP1-201ENST00000554987 333 ntBASIC7.62□□□□□ -1.19
USH2AO75445 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC7.62□□□□□ -1.19
USH2AO75445 AC008738.7-201ENST00000609744 511 ntBASIC7.62□□□□□ -1.19
USH2AO75445 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC7.62□□□□□ -1.19
USH2AO75445 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USH2AO75445 GMCL1P1-201ENST00000463439 1581 ntBASIC7.62□□□□□ -1.19
USH2AO75445 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USH2AO75445 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms