Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
SRGAP3O43295 AC106820.2-201ENST00000563775 3264 ntBASIC21.48■■□□□ 1.03
SRGAP3O43295 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 GPR89P-201ENST00000407924 1495 ntBASIC21.48■■□□□ 1.03
SRGAP3O43295 AL590627.1-203ENST00000421194 1026 ntBASIC21.48■■□□□ 1.03
SRGAP3O43295 AC098831.1-202ENST00000438821 336 ntBASIC21.48■■□□□ 1.03
SRGAP3O43295 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.48■■□□□ 1.03
SRGAP3O43295 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.48■■□□□ 1.03
SRGAP3O43295 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.48■■□□□ 1.03
SRGAP3O43295 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.48■■□□□ 1.03
SRGAP3O43295 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 AC117500.6-201ENST00000624871 588 ntBASIC21.48■■□□□ 1.03
SRGAP3O43295 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 LETM1P2-201ENST00000597330 2178 ntBASIC21.48■■□□□ 1.03
SRGAP3O43295 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.48■■□□□ 1.03
SRGAP3O43295 IL9RP2-201ENST00000423948 1312 ntBASIC21.48■■□□□ 1.03
SRGAP3O43295 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.48■■□□□ 1.03
SRGAP3O43295 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.48■■□□□ 1.03
SRGAP3O43295 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.48■■□□□ 1.03
SRGAP3O43295 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRGAP3O43295 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.47■■□□□ 1.03
SRGAP3O43295 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SRGAP3O43295 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP3O43295 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.47■■□□□ 1.03
SRGAP3O43295 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP3O43295 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP3O43295 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP3O43295 MIR1199-201ENST00000621445 119 ntBASIC21.47■■□□□ 1.03
SRGAP3O43295 AL645608.8-201ENST00000606034 2086 ntBASIC21.47■■□□□ 1.03
SRGAP3O43295 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP3O43295 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRGAP3O43295 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.47■■□□□ 1.03
SRGAP3O43295 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.46■■□□□ 1.03
SRGAP3O43295 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.46■■□□□ 1.03
SRGAP3O43295 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.46■■□□□ 1.03
SRGAP3O43295 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SRGAP3O43295 PTCHD3P3-201ENST00000403073 906 ntBASIC21.46■■□□□ 1.03
SRGAP3O43295 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SRGAP3O43295 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.46■■□□□ 1.03
SRGAP3O43295 IGHV3-22-201ENST00000520721 359 ntBASIC21.46■■□□□ 1.03
SRGAP3O43295 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.46■■□□□ 1.03
SRGAP3O43295 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.46■■□□□ 1.03
SRGAP3O43295 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 AC120114.3-201ENST00000611923 658 ntBASIC21.46■■□□□ 1.03
SRGAP3O43295 BX640515.1-201ENST00000617215 977 ntBASIC21.46■■□□□ 1.03
SRGAP3O43295 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.46■■□□□ 1.03
SRGAP3O43295 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
SRGAP3O43295 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SRGAP3O43295 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.46■■□□□ 1.03
SRGAP3O43295 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SRGAP3O43295 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRGAP3O43295 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
SRGAP3O43295 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP3O43295 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP3O43295 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP3O43295 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP3O43295 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP3O43295 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.45■■□□□ 1.02
SRGAP3O43295 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.45■■□□□ 1.02
SRGAP3O43295 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP3O43295 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.45■■□□□ 1.02
SRGAP3O43295 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.45■■□□□ 1.02
SRGAP3O43295 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
SRGAP3O43295 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP3O43295 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.45■■□□□ 1.02
SRGAP3O43295 AC108860.2-201ENST00000562760 2183 ntBASIC21.45■■□□□ 1.02
SRGAP3O43295 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SRGAP3O43295 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.45■■□□□ 1.02
SRGAP3O43295 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms