Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.27■□□□□ 0.36
PHGDHO43175 AC090616.6-201ENST00000582640 721 ntBASIC17.27■□□□□ 0.36
PHGDHO43175 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PHGDHO43175 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PHGDHO43175 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
PHGDHO43175 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PHGDHO43175 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHGDHO43175 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHGDHO43175 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHGDHO43175 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
PHGDHO43175 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHGDHO43175 AL049757.1-201ENST00000616842 1596 ntBASIC17.27■□□□□ 0.35
PHGDHO43175 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.27■□□□□ 0.35
PHGDHO43175 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHGDHO43175 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHGDHO43175 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PHGDHO43175 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.26■□□□□ 0.35
PHGDHO43175 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 FLJ38576-201ENST00000623820 2459 ntBASIC17.26■□□□□ 0.35
PHGDHO43175 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.26■□□□□ 0.35
PHGDHO43175 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 AC091607.1-201ENST00000490318 1060 ntBASIC17.26■□□□□ 0.35
PHGDHO43175 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.26■□□□□ 0.35
PHGDHO43175 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.26■□□□□ 0.35
PHGDHO43175 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 KRT8P10-201ENST00000450021 1447 ntBASIC17.26■□□□□ 0.35
PHGDHO43175 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 AL118508.1-201ENST00000613502 2345 ntBASIC17.26■□□□□ 0.35
PHGDHO43175 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.26■□□□□ 0.35
PHGDHO43175 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PHGDHO43175 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.26■□□□□ 0.35
PHGDHO43175 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHGDHO43175 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PHGDHO43175 CROCCP1-201ENST00000426910 5675 ntBASIC17.25■□□□□ 0.35
PHGDHO43175 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PHGDHO43175 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PHGDHO43175 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.25■□□□□ 0.35
PHGDHO43175 AC122714.2-201ENST00000502787 707 ntBASIC17.25■□□□□ 0.35
PHGDHO43175 KRT8P26-201ENST00000534154 1276 ntBASIC17.25■□□□□ 0.35
PHGDHO43175 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.25■□□□□ 0.35
PHGDHO43175 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PHGDHO43175 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHGDHO43175 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.25■□□□□ 0.35
PHGDHO43175 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.25■□□□□ 0.35
PHGDHO43175 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms