Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN9O14815 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CAPN9O14815 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN9O14815 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN9O14815 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN9O14815 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN9O14815 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN9O14815 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN9O14815 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CAPN9O14815 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CAPN9O14815 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CAPN9O14815 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.34■□□□□ 0.53
CAPN9O14815 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN9O14815 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.33■□□□□ 0.53
CAPN9O14815 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CAPN9O14815 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.33■□□□□ 0.53
CAPN9O14815 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.33■□□□□ 0.53
CAPN9O14815 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.33■□□□□ 0.53
CAPN9O14815 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CAPN9O14815 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN9O14815 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN9O14815 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.33■□□□□ 0.53
CAPN9O14815 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CAPN9O14815 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 AC003669.1-201ENST00000334569 611 ntBASIC18.33■□□□□ 0.52
CAPN9O14815 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 KLF4P1-201ENST00000412782 1185 ntBASIC18.33■□□□□ 0.52
CAPN9O14815 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.33■□□□□ 0.52
CAPN9O14815 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.33■□□□□ 0.52
CAPN9O14815 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.33■□□□□ 0.52
CAPN9O14815 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 AC008608.2-201ENST00000606089 416 ntBASIC18.33■□□□□ 0.52
CAPN9O14815 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CAPN9O14815 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPN9O14815 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.33■□□□□ 0.52
CAPN9O14815 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CAPN9O14815 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CAPN9O14815 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CAPN9O14815 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.33■□□□□ 0.52
CAPN9O14815 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPN9O14815 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN9O14815 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN9O14815 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPN9O14815 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPN9O14815 AKR1C7P-201ENST00000305623 895 ntBASIC18.32■□□□□ 0.52
CAPN9O14815 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CAPN9O14815 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.32■□□□□ 0.52
CAPN9O14815 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.32■□□□□ 0.52
CAPN9O14815 STK25P1-201ENST00000585406 838 ntBASIC18.32■□□□□ 0.52
CAPN9O14815 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.32■□□□□ 0.52
CAPN9O14815 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CAPN9O14815 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CAPN9O14815 AC132938.5-201ENST00000624980 1813 ntBASIC18.32■□□□□ 0.52
CAPN9O14815 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPN9O14815 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPN9O14815 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN9O14815 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CAPN9O14815 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CAPN9O14815 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CAPN9O14815 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN9O14815 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CAPN9O14815 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPN9O14815 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN9O14815 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPN9O14815 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.31■□□□□ 0.52
CAPN9O14815 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms