Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.92□□□□□ -0.18
UPK2O00526 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 AC009533.2-201ENST00000543664 586 ntBASIC13.92□□□□□ -0.18
UPK2O00526 AC124947.2-201ENST00000547118 1133 ntBASIC13.92□□□□□ -0.18
UPK2O00526 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK2O00526 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 AL118508.1-201ENST00000613502 2345 ntBASIC13.92□□□□□ -0.18
UPK2O00526 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK2O00526 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK2O00526 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK2O00526 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK2O00526 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK2O00526 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
UPK2O00526 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
UPK2O00526 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK2O00526 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK2O00526 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK2O00526 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK2O00526 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK2O00526 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK2O00526 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK2O00526 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK2O00526 VENTXP7-201ENST00000475503 772 ntBASIC13.91□□□□□ -0.18
UPK2O00526 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK2O00526 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.91□□□□□ -0.18
UPK2O00526 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK2O00526 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK2O00526 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 AL353593.2-201ENST00000602529 1483 ntBASIC13.91□□□□□ -0.18
UPK2O00526 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
UPK2O00526 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
UPK2O00526 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.91□□□□□ -0.18
UPK2O00526 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UPK2O00526 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.91□□□□□ -0.18
UPK2O00526 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
UPK2O00526 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK2O00526 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.9□□□□□ -0.18
UPK2O00526 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK2O00526 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
UPK2O00526 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.9□□□□□ -0.18
UPK2O00526 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.9□□□□□ -0.18
UPK2O00526 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.9□□□□□ -0.18
UPK2O00526 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 TMPOP1-202ENST00000424642 1267 ntBASIC13.9□□□□□ -0.18
UPK2O00526 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.9□□□□□ -0.18
UPK2O00526 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 STK19B-204ENST00000512515 211 ntBASIC13.9□□□□□ -0.18
UPK2O00526 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
UPK2O00526 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.9□□□□□ -0.18
UPK2O00526 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK2O00526 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms