Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 PMS2P4-201ENST00000412466 1052 ntBASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 INGX-202ENST00000489074 768 ntBASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 AC093214.1-201ENST00000511688 1107 ntBASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 AC022145.2-201ENST00000598203 171 ntBASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 GGTLC5P-201ENST00000617623 998 ntBASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 REXO1L3P-201ENST00000622202 1288 ntBASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRABD2BA6NFA1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRABD2BA6NFA1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRABD2BA6NFA1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 AL121761.2-201ENST00000598007 1648 ntBASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 PTCHD3P3-201ENST00000403073 906 ntBASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 OR7E47P-204ENST00000575924 449 ntBASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 AL390955.2-201ENST00000603032 514 ntBASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRABD2BA6NFA1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 DUX4L27-201ENST00000554796 1261 ntBASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.63■□□□□ 0.25
TRABD2BA6NFA1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms