Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 FAM220CP-201ENST00000395253 831 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AC005104.2-201ENST00000427818 678 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AC246785.2-201ENST00000432512 513 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 MINOS1P3-201ENST00000457048 203 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AC002558.1-201ENST00000488906 803 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AC111152.3-201ENST00000569699 673 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 Z69720.1-201ENST00000601483 472 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AP000550.4-202ENST00000639755 178 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 LYSMD4-203ENST00000378904 2122 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AC126755.1-201ENST00000525846 6405 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AC108860.2-201ENST00000562760 2183 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 SIRPAP1-201ENST00000448467 1770 ntBASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 MYCLP1-201ENST00000372451 1075 ntBASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 LINC00265-3P-201ENST00000447588 903 ntBASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 AC109462.3-201ENST00000573934 613 ntBASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 AP002414.4-201ENST00000589764 1148 ntBASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 AC005336.2-201ENST00000593183 939 ntBASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 AL358472.4-201ENST00000633140 710 ntBASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRGV1A0A0A0MS02 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRGV1A0A0A0MS02 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms