Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 AC092666.2-201ENST00000613287 246 ntBASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 AL391005.1-201ENST00000623953 2435 ntBASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV18A0A075B6X5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 AC009947.2-201ENST00000444014 672 ntBASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 AL662844.4-201ENST00000606367 2838 ntBASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV18A0A075B6X5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 HYMAI-201ENST00000635591 3347 ntBASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 UNC93B2-201ENST00000285383 730 ntBASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV18A0A075B6X5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms