Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 AP002383.4-201ENST00000442518 975 ntBASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 KRT18P35-201ENST00000510488 1269 ntBASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 TPSP2-201ENST00000561760 610 ntBASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 AC091076.1-201ENST00000610741 619 ntBASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 AL049757.1-201ENST00000616842 1596 ntBASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 AC091607.1-201ENST00000490318 1060 ntBASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 AP005901.3-202ENST00000581653 237 ntBASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 AP002414.4-201ENST00000589764 1148 ntBASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 AC011467.2-201ENST00000598425 242 ntBASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 AL358472.4-201ENST00000633140 710 ntBASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHGA11Q9Y5H2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 KRT17P6-201ENST00000453795 1220 ntBASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 MINOS1P3-201ENST00000457048 203 ntBASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 TOB2P1-201ENST00000469761 992 ntBASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 AC069148.1-201ENST00000608741 768 ntBASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA11Q9Y5H2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms