Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 AC004817.3-201ENST00000602957 2129 ntBASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 AL353593.2-201ENST00000602529 1483 ntBASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 AC093010.1-201ENST00000473625 1624 ntBASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA9Q9Y5G4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 NCF1C-201ENST00000438382 1427 ntBASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 AC254562.1-201ENST00000417586 456 ntBASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 PRSS29P-201ENST00000440800 595 ntBASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 KRT18P2-201ENST00000447938 1258 ntBASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 AC138028.4-201ENST00000564984 1845 ntBASIC16.22■□□□□ 0.19
PCDHGA9Q9Y5G4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 AC093677.2-201ENST00000600169 1863 ntBASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA9Q9Y5G4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms