Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 METTL21AP1-201ENST00000438852 635 ntBASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 AC023141.13-201ENST00000604991 943 ntBASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 ELL2P1-201ENST00000413990 1906 ntBASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRG3Q9Y2Y8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 KRT18P28-201ENST00000453838 1332 ntBASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 FAM58CP-201ENST00000435741 640 ntBASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 MKNK2P1-201ENST00000437526 628 ntBASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 CXCL1P1-201ENST00000502804 216 ntBASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 AC007064.4-201ENST00000637740 555 ntBASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRG3Q9Y2Y8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 AC074386.1-202ENST00000463561 864 ntBASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 AL031432.2-201ENST00000566714 459 ntBASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 AL928711.1-201ENST00000570165 459 ntBASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 AL355385.1-201ENST00000606123 409 ntBASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 LINC01451-201ENST00000623792 534 ntBASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.48■□□□□ 0.55
PRG3Q9Y2Y8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms