Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.24□□□□□ -0.13
RCL1Q9Y2P8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 AL662844.4-201ENST00000606367 2838 ntBASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 AL355802.2-201ENST00000402069 882 ntBASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RCL1Q9Y2P8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 AL513523.2-202ENST00000427283 2040 ntBASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 FLJ16779-201ENST00000612722 7638 ntBASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 BX276092.7-203ENST00000637198 1536 ntBASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 C1QBPP2-201ENST00000528754 825 ntBASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 CD177P1-201ENST00000606252 935 ntBASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 AL023803.3-201ENST00000615559 522 ntBASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 AC007950.2-201ENST00000615045 2347 ntBASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RCL1Q9Y2P8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms