Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 AC116407.4-201ENST00000623319 1061 ntBASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 AC016734.2-201ENST00000624325 1377 ntBASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIF3AQ9Y2N7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 AC060834.1-201ENST00000443027 2032 ntBASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 AC091607.1-201ENST00000490318 1060 ntBASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 AC011467.2-201ENST00000598425 242 ntBASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 NKILA-202ENST00000614771 2598 ntBASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.68■□□□□ 0.1
HIF3AQ9Y2N7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 AP005901.3-202ENST00000581653 237 ntBASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.67■□□□□ 0.1
HIF3AQ9Y2N7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIF3AQ9Y2N7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms