Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 AC008267.7-201ENST00000624570 1194 ntBASIC21.86■■□□□ 1.09
CCNL1Q9UK58 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CCNL1Q9UK58 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 REXO1L11P-201ENST00000620964 1927 ntBASIC21.85■■□□□ 1.09
CCNL1Q9UK58 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 AL139327.4-201ENST00000612362 153 ntBASIC21.85■■□□□ 1.09
CCNL1Q9UK58 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 AC100757.3-201ENST00000622361 1406 ntBASIC21.85■■□□□ 1.09
CCNL1Q9UK58 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.85■■□□□ 1.09
CCNL1Q9UK58 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 AC027369.6-201ENST00000525520 931 ntBASIC21.84■■□□□ 1.09
CCNL1Q9UK58 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 AC027307.2-201ENST00000591252 911 ntBASIC21.84■■□□□ 1.09
CCNL1Q9UK58 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 KRT18P55-202ENST00000578578 1546 ntBASIC21.84■■□□□ 1.09
CCNL1Q9UK58 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCNL1Q9UK58 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 MIR346-201ENST00000362234 95 ntBASIC21.83■■□□□ 1.09
CCNL1Q9UK58 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 TSSK5P-201ENST00000423978 907 ntBASIC21.83■■□□□ 1.09
CCNL1Q9UK58 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 AC004233.3-201ENST00000607794 1269 ntBASIC21.83■■□□□ 1.09
CCNL1Q9UK58 AL590560.3-201ENST00000623350 461 ntBASIC21.83■■□□□ 1.09
CCNL1Q9UK58 AC073592.8-201ENST00000624126 511 ntBASIC21.83■■□□□ 1.09
CCNL1Q9UK58 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.83■■□□□ 1.09
CCNL1Q9UK58 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.83■■□□□ 1.08
CCNL1Q9UK58 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CCNL1Q9UK58 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCNL1Q9UK58 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCNL1Q9UK58 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms