Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSFQ9UBX1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSFQ9UBX1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSFQ9UBX1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSFQ9UBX1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.33■□□□□ 0.2
CTSFQ9UBX1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.32■□□□□ 0.2
CTSFQ9UBX1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 AL591424.1-201ENST00000442569 1213 ntBASIC16.32■□□□□ 0.2
CTSFQ9UBX1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 AC108073.2-201ENST00000464002 357 ntBASIC16.32■□□□□ 0.2
CTSFQ9UBX1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSFQ9UBX1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 KRT18P3-201ENST00000451602 1288 ntBASIC16.31■□□□□ 0.2
CTSFQ9UBX1 PGAM5P1-201ENST00000518923 814 ntBASIC16.31■□□□□ 0.2
CTSFQ9UBX1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 AL805961.1-202ENST00000641562 540 ntBASIC16.31■□□□□ 0.2
CTSFQ9UBX1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 LYSMD4-203ENST00000378904 2122 ntBASIC16.31■□□□□ 0.2
CTSFQ9UBX1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSFQ9UBX1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 GPR89P-201ENST00000407924 1495 ntBASIC16.3■□□□□ 0.2
CTSFQ9UBX1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSFQ9UBX1 PTCHD3P3-201ENST00000403073 906 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms