Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
HDAC6Q9UBN7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 AC023274.1-201ENST00000418278 595 ntBASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 AC136632.2-201ENST00000512891 861 ntBASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 PGM5P2-202ENST00000637225 1043 ntBASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 AL049757.1-201ENST00000616842 1596 ntBASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 AL353593.2-201ENST00000602529 1483 ntBASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.6■□□□□ 0.73
HDAC6Q9UBN7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AL096828.2-201ENST00000567259 1965 ntBASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AL020989.1-201ENST00000422979 469 ntBASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AC108751.1-201ENST00000490852 363 ntBASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AC064836.3-201ENST00000607928 673 ntBASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AC132938.5-201ENST00000624980 1813 ntBASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.59■□□□□ 0.73
HDAC6Q9UBN7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms