Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CPNE7Q9UBL6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 AL590787.1-201ENST00000568856 1315 ntBASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 KRT18P13-201ENST00000400056 1290 ntBASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 CRYGEP-201ENST00000412192 528 ntBASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 MIR4751-201ENST00000578027 74 ntBASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 AC064836.3-201ENST00000607928 673 ntBASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 AC004790.2-201ENST00000623588 572 ntBASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CPNE7Q9UBL6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 BX842568.4-201ENST00000421222 227 ntBASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 PRSS29P-201ENST00000440800 595 ntBASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 VN2R19P-201ENST00000442399 1052 ntBASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 AC092865.5-201ENST00000545435 363 ntBASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 GGTLC5P-201ENST00000617623 998 ntBASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.79■□□□□ 0.28
CPNE7Q9UBL6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms