Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00474Q9P2X8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 LINC00265-3P-201ENST00000447588 903 ntBASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 LINC01451-201ENST00000623792 534 ntBASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 AC233702.3-201ENST00000578656 1387 ntBASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
LINC00474Q9P2X8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 CROCCP2-202ENST00000412962 2773 ntBASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 AL662844.4-201ENST00000606367 2838 ntBASIC11.35□□□□□ -0.59
LINC00474Q9P2X8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms