Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 MIR1233-2-201ENST00000408138 82 ntBASIC15.93■□□□□ 0.14
LRFN1Q9P244 MIR1233-1-201ENST00000408722 82 ntBASIC15.93■□□□□ 0.14
LRFN1Q9P244 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 AC064836.3-201ENST00000607928 673 ntBASIC15.93■□□□□ 0.14
LRFN1Q9P244 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 AC139530.3-201ENST00000620344 690 ntBASIC15.93■□□□□ 0.14
LRFN1Q9P244 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.93■□□□□ 0.14
LRFN1Q9P244 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRFN1Q9P244 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 GPR89P-201ENST00000407924 1495 ntBASIC15.92■□□□□ 0.14
LRFN1Q9P244 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 CRYGEP-201ENST00000412192 528 ntBASIC15.92■□□□□ 0.14
LRFN1Q9P244 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 IGHV3-65-201ENST00000523210 341 ntBASIC15.92■□□□□ 0.14
LRFN1Q9P244 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 MIR4751-201ENST00000578027 74 ntBASIC15.92■□□□□ 0.14
LRFN1Q9P244 AL353135.1-201ENST00000606729 504 ntBASIC15.92■□□□□ 0.14
LRFN1Q9P244 AC008667.4-201ENST00000607370 168 ntBASIC15.92■□□□□ 0.14
LRFN1Q9P244 LINC01451-201ENST00000623792 534 ntBASIC15.92■□□□□ 0.14
LRFN1Q9P244 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.92■□□□□ 0.14
LRFN1Q9P244 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRFN1Q9P244 AC046185.3-201ENST00000623228 1824 ntBASIC15.91■□□□□ 0.14
LRFN1Q9P244 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRFN1Q9P244 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRFN1Q9P244 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRFN1Q9P244 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRFN1Q9P244 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRFN1Q9P244 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRFN1Q9P244 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 AC108073.2-201ENST00000464002 357 ntBASIC15.91■□□□□ 0.14
LRFN1Q9P244 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.91■□□□□ 0.14
LRFN1Q9P244 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms