Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 KRT18P65-201ENST00000439811 1286 ntBASIC16.85■□□□□ 0.29
NDE1Q9NXR1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 TSPY17P-201ENST00000450329 467 ntBASIC16.85■□□□□ 0.29
NDE1Q9NXR1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 AC113404.2-201ENST00000507884 177 ntBASIC16.85■□□□□ 0.29
NDE1Q9NXR1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 AC104771.1-201ENST00000603335 964 ntBASIC16.85■□□□□ 0.29
NDE1Q9NXR1 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.85■□□□□ 0.29
NDE1Q9NXR1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.85■□□□□ 0.29
NDE1Q9NXR1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 AP003041.3-201ENST00000527151 707 ntBASIC16.84■□□□□ 0.29
NDE1Q9NXR1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NDE1Q9NXR1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NDE1Q9NXR1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
NDE1Q9NXR1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
NDE1Q9NXR1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NDE1Q9NXR1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NDE1Q9NXR1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 FAM197Y1-201ENST00000421178 764 ntBASIC16.83■□□□□ 0.28
NDE1Q9NXR1 SLC25A1P2-201ENST00000430693 912 ntBASIC16.83■□□□□ 0.28
NDE1Q9NXR1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 AL135905.2-201ENST00000584934 1404 ntBASIC16.83■□□□□ 0.28
NDE1Q9NXR1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.83■□□□□ 0.28
NDE1Q9NXR1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms