Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 KRT8P26-201ENST00000534154 1276 ntBASIC16.19■□□□□ 0.18
RLIMQ9NVW2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 AC090616.6-201ENST00000582640 721 ntBASIC16.19■□□□□ 0.18
RLIMQ9NVW2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 AC016396.2-201ENST00000562575 1417 ntBASIC16.19■□□□□ 0.18
RLIMQ9NVW2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 AC005332.1-201ENST00000577698 1310 ntBASIC16.19■□□□□ 0.18
RLIMQ9NVW2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 AC116353.5-201ENST00000638148 1699 ntBASIC16.18■□□□□ 0.18
RLIMQ9NVW2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 AC005336.2-201ENST00000593183 939 ntBASIC16.18■□□□□ 0.18
RLIMQ9NVW2 AL121956.5-201ENST00000625261 221 ntBASIC16.18■□□□□ 0.18
RLIMQ9NVW2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 AC125634.1-201ENST00000438758 1403 ntBASIC16.18■□□□□ 0.18
RLIMQ9NVW2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
RLIMQ9NVW2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AC046185.3-201ENST00000623228 1824 ntBASIC16.17■□□□□ 0.18
RLIMQ9NVW2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 FAM86EP-206ENST00000510506 987 ntBASIC16.17■□□□□ 0.18
RLIMQ9NVW2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AC011840.4-201ENST00000578471 627 ntBASIC16.17■□□□□ 0.18
RLIMQ9NVW2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 AL353801.3-201ENST00000609898 542 ntBASIC16.17■□□□□ 0.18
RLIMQ9NVW2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RLIMQ9NVW2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms