Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.11■□□□□ 0.97
ECHDC1Q9NTX5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 AC106820.2-201ENST00000563775 3264 ntBASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 KRT18P67-201ENST00000432816 1264 ntBASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 HNRNPDP1-201ENST00000439535 754 ntBASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 AC148477.8-201ENST00000624298 468 ntBASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 AC107918.4-202ENST00000641623 219 ntBASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ECHDC1Q9NTX5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 LAGE3P1-201ENST00000425356 484 ntBASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 AL139424.1-201ENST00000607572 797 ntBASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 AC004706.3-202ENST00000621574 984 ntBASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ECHDC1Q9NTX5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 AF186996.4-201ENST00000467186 377 ntBASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 OR7E14P-202ENST00000530490 1290 ntBASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.08■□□□□ 0.97
ECHDC1Q9NTX5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
ECHDC1Q9NTX5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.07■□□□□ 0.96
ECHDC1Q9NTX5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms