Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 PPT1-215ENST00000641471 2368 ntBASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 AC005562.1-201ENST00000583030 3219 ntBASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
CDC42SE1Q9NRR8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
CDC42SE1Q9NRR8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC8.84□□□□□ -1
CDC42SE1Q9NRR8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -1
CDC42SE1Q9NRR8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 AC097637.2-201ENST00000624096 1997 ntBASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 MYC-208ENST00000641036 567 ntBASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 AC232323.1-201ENST00000540724 2099 ntBASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 REXO1L5P-201ENST00000622260 2098 ntBASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
CDC42SE1Q9NRR8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 AF131216.4-201ENST00000638924 1588 ntBASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 MTHFR-217ENST00000641820 1569 ntBASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 AC006504.5-208ENST00000588784 2401 ntBASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
CDC42SE1Q9NRR8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms