Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 AC093525.9-201ENST00000624961 1746 ntBASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 AC022211.2-201ENST00000585075 2527 ntBASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 LINC02012-201ENST00000608206 1725 ntBASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 STK25P1-201ENST00000585406 838 ntBASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 PCDHA12-202ENST00000613593 2588 ntBASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 AL353593.2-201ENST00000602529 1483 ntBASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NEUROD4Q9HD90 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 AC011467.2-201ENST00000598425 242 ntBASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 Z69720.1-201ENST00000601483 472 ntBASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
NEUROD4Q9HD90 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEUROD4Q9HD90 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms