Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 AC117500.6-201ENST00000624871 588 ntBASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 MIR940-201ENST00000401276 94 ntBASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 KRT18P27-201ENST00000427733 1299 ntBASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 MIR1199-201ENST00000621445 119 ntBASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 AC104109.2-201ENST00000602919 1418 ntBASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.1■□□□□ 0.81
VAT1LQ9HCJ6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 ELK2BP-201ENST00000415014 1224 ntBASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 UNC93B6-202ENST00000528242 690 ntBASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.09■□□□□ 0.81
VAT1LQ9HCJ6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 AC136632.2-201ENST00000512891 861 ntBASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 AC106730.1-201ENST00000566722 1090 ntBASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 AL139424.1-201ENST00000607572 797 ntBASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VAT1LQ9HCJ6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
VAT1LQ9HCJ6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VAT1LQ9HCJ6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
VAT1LQ9HCJ6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
VAT1LQ9HCJ6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.08■□□□□ 0.8
VAT1LQ9HCJ6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VAT1LQ9HCJ6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VAT1LQ9HCJ6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms