Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 FDX1P1-201ENST00000449115 551 ntBASIC16.11■□□□□ 0.17
UBQLN3Q9H347 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 AC122714.2-201ENST00000502787 707 ntBASIC16.11■□□□□ 0.17
UBQLN3Q9H347 AP002469.2-201ENST00000531724 424 ntBASIC16.11■□□□□ 0.17
UBQLN3Q9H347 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 AP001269.4-201ENST00000609611 512 ntBASIC16.11■□□□□ 0.17
UBQLN3Q9H347 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 KRT8P10-201ENST00000450021 1447 ntBASIC16.11■□□□□ 0.17
UBQLN3Q9H347 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 ABCD1P5-201ENST00000445663 754 ntBASIC16.1■□□□□ 0.17
UBQLN3Q9H347 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 AL355877.3-201ENST00000622820 899 ntBASIC16.1■□□□□ 0.17
UBQLN3Q9H347 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.1■□□□□ 0.17
UBQLN3Q9H347 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 AC084018.2-201ENST00000613093 2607 ntBASIC16.09■□□□□ 0.17
UBQLN3Q9H347 PKD1P1-201ENST00000458669 6805 ntBASIC16.09■□□□□ 0.17
UBQLN3Q9H347 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 COX5BP2-201ENST00000392354 334 ntBASIC16.09■□□□□ 0.17
UBQLN3Q9H347 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 AC008608.2-201ENST00000606089 416 ntBASIC16.09■□□□□ 0.17
UBQLN3Q9H347 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 AP005117.1-201ENST00000584346 1413 ntBASIC16.09■□□□□ 0.17
UBQLN3Q9H347 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.09■□□□□ 0.17
UBQLN3Q9H347 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.08■□□□□ 0.17
UBQLN3Q9H347 AL121761.2-201ENST00000598007 1648 ntBASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms