Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXP3Q9BZS1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 AC096633.1-201ENST00000422446 749 ntBASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 AL845331.1-201ENST00000424978 1190 ntBASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 TSPY22P-201ENST00000427496 604 ntBASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 AC246785.2-201ENST00000432512 513 ntBASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 AC004263.2-201ENST00000617183 678 ntBASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXP3Q9BZS1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 RNF126P1-202ENST00000569893 925 ntBASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 KRT18P1-202ENST00000452408 1331 ntBASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 OR6D1P-203ENST00000641209 4860 ntBASIC17.92■□□□□ 0.46
FOXP3Q9BZS1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 AC046185.3-201ENST00000623228 1824 ntBASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 CHCHD2P8-201ENST00000429873 447 ntBASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 UNC93B7-201ENST00000509439 705 ntBASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.91■□□□□ 0.46
FOXP3Q9BZS1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXP3Q9BZS1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms