Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.9■□□□□ 0.3
PKP4Q99569 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PKP4Q99569 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP4Q99569 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PKP4Q99569 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PKP4Q99569 SIGLEC16-201ENST00000599858 1437 ntBASIC16.9■□□□□ 0.3
PKP4Q99569 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.9■□□□□ 0.3
PKP4Q99569 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 BX005266.1-201ENST00000473402 457 ntBASIC16.9■□□□□ 0.3
PKP4Q99569 AF238378.1-201ENST00000526806 358 ntBASIC16.9■□□□□ 0.3
PKP4Q99569 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.9■□□□□ 0.3
PKP4Q99569 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.9■□□□□ 0.3
PKP4Q99569 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP4Q99569 AC008608.2-201ENST00000606089 416 ntBASIC16.9■□□□□ 0.3
PKP4Q99569 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP4Q99569 AL355877.3-201ENST00000622820 899 ntBASIC16.9■□□□□ 0.3
PKP4Q99569 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PKP4Q99569 AC116353.5-201ENST00000638148 1699 ntBASIC16.9■□□□□ 0.3
PKP4Q99569 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.9■□□□□ 0.3
PKP4Q99569 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PKP4Q99569 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP4Q99569 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PKP4Q99569 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PKP4Q99569 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.89■□□□□ 0.3
PKP4Q99569 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.89■□□□□ 0.3
PKP4Q99569 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.89■□□□□ 0.29
PKP4Q99569 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.89■□□□□ 0.29
PKP4Q99569 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PKP4Q99569 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PKP4Q99569 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PKP4Q99569 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.89■□□□□ 0.29
PKP4Q99569 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
PKP4Q99569 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PKP4Q99569 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
PKP4Q99569 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 SAPCD2P3-201ENST00000455031 850 ntBASIC16.89■□□□□ 0.29
PKP4Q99569 FGFR3P6-201ENST00000457012 610 ntBASIC16.89■□□□□ 0.29
PKP4Q99569 NKAPP1-205ENST00000585790 367 ntBASIC16.89■□□□□ 0.29
PKP4Q99569 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.89■□□□□ 0.29
PKP4Q99569 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.89■□□□□ 0.29
PKP4Q99569 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.89■□□□□ 0.29
PKP4Q99569 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
PKP4Q99569 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PKP4Q99569 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PKP4Q99569 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PKP4Q99569 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PKP4Q99569 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PKP4Q99569 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.88■□□□□ 0.29
PKP4Q99569 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.88■□□□□ 0.29
PKP4Q99569 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PKP4Q99569 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PKP4Q99569 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PKP4Q99569 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.88■□□□□ 0.29
PKP4Q99569 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 SLC25A1P3-201ENST00000395415 828 ntBASIC16.88■□□□□ 0.29
PKP4Q99569 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.88■□□□□ 0.29
PKP4Q99569 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.88■□□□□ 0.29
PKP4Q99569 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.88■□□□□ 0.29
PKP4Q99569 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.88■□□□□ 0.29
PKP4Q99569 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.88■□□□□ 0.29
PKP4Q99569 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.88■□□□□ 0.29
PKP4Q99569 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.88■□□□□ 0.29
PKP4Q99569 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PKP4Q99569 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PKP4Q99569 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PKP4Q99569 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms