Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.95□□□□□ -0.02
CMTM3Q96MX0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 KRT18P6-201ENST00000555540 1265 ntBASIC14.95□□□□□ -0.02
CMTM3Q96MX0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CMTM3Q96MX0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 EGFEM1P-202ENST00000431685 1563 ntBASIC14.94□□□□□ -0.02
CMTM3Q96MX0 AC006538.1-201ENST00000567905 1585 ntBASIC14.94□□□□□ -0.02
CMTM3Q96MX0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 AC010653.2-201ENST00000623505 997 ntBASIC14.94□□□□□ -0.02
CMTM3Q96MX0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CMTM3Q96MX0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 HLA-A-202ENST00000376806 1854 ntBASIC14.93□□□□□ -0.02
CMTM3Q96MX0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.93□□□□□ -0.02
CMTM3Q96MX0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CMTM3Q96MX0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 AC008741.2-201ENST00000612792 3115 ntBASIC14.92□□□□□ -0.02
CMTM3Q96MX0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms