Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE4Q96A23 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE4Q96A23 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.61■□□□□ 0.09
CPNE4Q96A23 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CPNE4Q96A23 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE4Q96A23 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE4Q96A23 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.61■□□□□ 0.09
CPNE4Q96A23 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
CPNE4Q96A23 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CPNE4Q96A23 TNRC18P3-201ENST00000441896 2691 ntBASIC15.61■□□□□ 0.09
CPNE4Q96A23 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 RNPS1P1-201ENST00000507437 918 ntBASIC15.6■□□□□ 0.09
CPNE4Q96A23 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 AC021087.4-201ENST00000563761 564 ntBASIC15.6■□□□□ 0.09
CPNE4Q96A23 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 AC148477.5-201ENST00000625164 1645 ntBASIC15.6■□□□□ 0.09
CPNE4Q96A23 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE4Q96A23 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.6■□□□□ 0.09
CPNE4Q96A23 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE4Q96A23 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 AC018712.1-201ENST00000455767 687 ntBASIC15.59■□□□□ 0.09
CPNE4Q96A23 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE4Q96A23 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE4Q96A23 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE4Q96A23 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE4Q96A23 LYSMD4-203ENST00000378904 2122 ntBASIC15.59■□□□□ 0.09
CPNE4Q96A23 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE4Q96A23 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE4Q96A23 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CPNE4Q96A23 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CPNE4Q96A23 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPNE4Q96A23 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CPNE4Q96A23 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.58■□□□□ 0.09
CPNE4Q96A23 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CPNE4Q96A23 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPNE4Q96A23 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPNE4Q96A23 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.58■□□□□ 0.09
CPNE4Q96A23 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.58■□□□□ 0.09
CPNE4Q96A23 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CPNE4Q96A23 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 MST1L-201ENST00000442552 2185 ntBASIC15.58■□□□□ 0.08
CPNE4Q96A23 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE4Q96A23 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE4Q96A23 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms