Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.27■□□□□ 0.04
TMEM54Q969K7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TMEM54Q969K7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM54Q969K7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TMEM54Q969K7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM54Q969K7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEM54Q969K7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM54Q969K7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM54Q969K7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 AL121761.2-201ENST00000598007 1648 ntBASIC15.26■□□□□ 0.03
TMEM54Q969K7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 SCARNA2-201ENST00000458748 420 ntBASIC15.26■□□□□ 0.03
TMEM54Q969K7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 AC124947.2-201ENST00000547118 1133 ntBASIC15.26■□□□□ 0.03
TMEM54Q969K7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TMEM54Q969K7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 GPR89P-201ENST00000407924 1495 ntBASIC15.26■□□□□ 0.03
TMEM54Q969K7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM54Q969K7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 LTB4R2-202ENST00000528054 3092 ntBASIC15.25■□□□□ 0.03
TMEM54Q969K7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 AC064862.7-201ENST00000604520 867 ntBASIC15.25■□□□□ 0.03
TMEM54Q969K7 AL353135.1-201ENST00000606729 504 ntBASIC15.25■□□□□ 0.03
TMEM54Q969K7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 NCF1C-201ENST00000438382 1427 ntBASIC15.25■□□□□ 0.03
TMEM54Q969K7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM54Q969K7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEM54Q969K7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM54Q969K7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM54Q969K7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM54Q969K7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM54Q969K7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM54Q969K7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TMEM54Q969K7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TMEM54Q969K7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TMEM54Q969K7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM54Q969K7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms