Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC3Q92529 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SHC3Q92529 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC3Q92529 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC3Q92529 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC3Q92529 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SHC3Q92529 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC3Q92529 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC3Q92529 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC3Q92529 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC3Q92529 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC3Q92529 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHC3Q92529 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC3Q92529 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC3Q92529 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.48■□□□□ 0.55
SHC3Q92529 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.48■□□□□ 0.55
SHC3Q92529 AL121772.3-201ENST00000610840 674 ntBASIC18.48■□□□□ 0.55
SHC3Q92529 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SHC3Q92529 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHC3Q92529 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC3Q92529 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC3Q92529 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SHC3Q92529 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SHC3Q92529 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC3Q92529 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC3Q92529 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SHC3Q92529 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SHC3Q92529 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SHC3Q92529 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC3Q92529 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC3Q92529 GPR89P-201ENST00000407924 1495 ntBASIC18.47■□□□□ 0.55
SHC3Q92529 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.47■□□□□ 0.55
SHC3Q92529 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC3Q92529 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
SHC3Q92529 PRYP5-201ENST00000451909 266 ntBASIC18.47■□□□□ 0.55
SHC3Q92529 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC3Q92529 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SHC3Q92529 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC3Q92529 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC3Q92529 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC3Q92529 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.47■□□□□ 0.55
SHC3Q92529 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC3Q92529 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC3Q92529 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC3Q92529 FRMD8P1-201ENST00000440433 1524 ntBASIC18.47■□□□□ 0.55
SHC3Q92529 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC3Q92529 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC3Q92529 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 AC097637.2-201ENST00000624096 1997 ntBASIC18.46■□□□□ 0.55
SHC3Q92529 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.46■□□□□ 0.55
SHC3Q92529 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.46■□□□□ 0.55
SHC3Q92529 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.46■□□□□ 0.55
SHC3Q92529 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.46■□□□□ 0.55
SHC3Q92529 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.46■□□□□ 0.55
SHC3Q92529 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SHC3Q92529 NKILA-202ENST00000614771 2598 ntBASIC18.46■□□□□ 0.55
SHC3Q92529 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SHC3Q92529 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.46■□□□□ 0.55
SHC3Q92529 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHC3Q92529 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.46■□□□□ 0.55
SHC3Q92529 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms