Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 AL353807.1-201ENST00000427475 662 ntBASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 AC133681.1-201ENST00000465482 601 ntBASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 AC022517.1-201ENST00000592429 346 ntBASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 AC010240.3-201ENST00000607688 395 ntBASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 AC110285.5-201ENST00000611501 352 ntBASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MBD3L1Q8WWY6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 KRT18P29-201ENST00000397031 1267 ntBASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 MESTP1-201ENST00000404287 994 ntBASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.63□□□□□ -0.23
MBD3L1Q8WWY6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.62□□□□□ -0.23
MBD3L1Q8WWY6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms