Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 IGHV3-52-201ENST00000519770 353 ntBASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 AC109462.3-201ENST00000573934 613 ntBASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 AL390719.2-201ENST00000606993 987 ntBASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 AL031432.5-201ENST00000641059 760 ntBASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 AC092171.3-201ENST00000610122 2651 ntBASIC15.2■□□□□ 0.02
RPS4Y2Q8TD47 AL391005.1-201ENST00000623953 2435 ntBASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 AC007967.3-201ENST00000434308 558 ntBASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 AC010203.1-204ENST00000548782 407 ntBASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4Y2Q8TD47 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 FAM8A6P-201ENST00000407496 1135 ntBASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 BX664615.1-201ENST00000443558 458 ntBASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 AC092597.1-201ENST00000487352 616 ntBASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 AC122714.2-201ENST00000502787 707 ntBASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPS4Y2Q8TD47 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms