Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 UNC93B2-201ENST00000285383 730 ntBASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 AL049637.2-201ENST00000641778 930 ntBASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAB3IL1Q8TBN0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IL1Q8TBN0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB3IL1Q8TBN0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RAB3IL1Q8TBN0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IL1Q8TBN0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB3IL1Q8TBN0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IL1Q8TBN0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IL1Q8TBN0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3IL1Q8TBN0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
RAB3IL1Q8TBN0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 NEK4P2-201ENST00000580004 1012 ntBASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3IL1Q8TBN0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 TSPY7P-201ENST00000431358 1114 ntBASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IL1Q8TBN0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms