Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 AC097374.2-201ENST00000618617 1306 ntBASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 AC005915.1-201ENST00000624912 2018 ntBASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 AC092053.1-201ENST00000605787 1936 ntBASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 AL845331.1-201ENST00000424978 1190 ntBASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLHC1Q8NHS4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 RN7SL606P-201ENST00000472779 293 ntBASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 LINC01238-205ENST00000567549 1107 ntBASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AC011498.5-201ENST00000592027 486 ntBASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AC005336.2-201ENST00000593183 939 ntBASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 IGHV3-41-201ENST00000613121 348 ntBASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AC125634.1-201ENST00000438758 1403 ntBASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLHC1Q8NHS4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
CLHC1Q8NHS4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms