Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDND2Q8NHS1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDND2Q8NHS1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDND2Q8NHS1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDND2Q8NHS1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDND2Q8NHS1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 MIR574-201ENST00000385209 96 ntBASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 AC096633.1-201ENST00000422446 749 ntBASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 AC010460.3-201ENST00000511359 1579 ntBASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 OR7E14P-202ENST00000530490 1290 ntBASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDND2Q8NHS1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 DUTP2-201ENST00000519164 463 ntBASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 NKAPP1-205ENST00000585790 367 ntBASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 AC116407.3-201ENST00000623905 1129 ntBASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 AP000867.4-201ENST00000641616 219 ntBASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDND2Q8NHS1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDND2Q8NHS1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms