Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 ABHD17AP5-201ENST00000580133 923 ntBASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 AC126544.1-201ENST00000580842 1059 ntBASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 AL603756.1-201ENST00000606511 2163 ntBASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 FAM45BP-202ENST00000592932 1624 ntBASIC9.53□□□□□ -0.88
SPTSSBQ8NFR3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 AC080128.2-201ENST00000641520 11863 ntBASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC9.52□□□□□ -0.88
SPTSSBQ8NFR3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 UBQLN4P1-201ENST00000461599 1801 ntBASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 AC138907.5-202ENST00000569484 235 ntBASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 AC243732.1-201ENST00000612648 864 ntBASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 AL023806.1-201ENST00000603994 1649 ntBASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SPTSSBQ8NFR3 AC138028.4-201ENST00000564984 1845 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms