Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATPAF2Q8N5M1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 AC079776.2-201ENST00000641154 1609 ntBASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 AL135999.2-201ENST00000622438 1686 ntBASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 SIGLEC16-201ENST00000599858 1437 ntBASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATPAF2Q8N5M1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 AC008608.2-201ENST00000606089 416 ntBASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 REXO1L6P-202ENST00000619970 1078 ntBASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 AC073592.4-201ENST00000623827 446 ntBASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATPAF2Q8N5M1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 AC116353.5-201ENST00000638148 1699 ntBASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 DUSP5P1-201ENST00000441325 1139 ntBASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 SAPCD2P3-201ENST00000455031 850 ntBASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 MTDHP3-201ENST00000594186 672 ntBASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATPAF2Q8N5M1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.77■□□□□ 0.44
ATPAF2Q8N5M1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms