Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FAM185BP-201ENST00000443595 716 ntBASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SYNPOQ8N3V7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 AC004461.1-201ENST00000412461 403 ntBASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 AC112191.1-201ENST00000523689 701 ntBASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.58■□□□□ 0.4
SYNPOQ8N3V7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPOQ8N3V7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 AL590787.1-201ENST00000568856 1315 ntBASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.56■□□□□ 0.4
SYNPOQ8N3V7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms