Protein–RNA interactions for Protein: Q8IYK4

COLGALT2, Procollagen galactosyltransferase 2, humanhuman

Predictions only

Length 626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT2Q8IYK4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 SLC25A6P5-201ENST00000435663 894 ntBASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 AC087163.2-201ENST00000457299 853 ntBASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 AC027796.2-201ENST00000575326 344 ntBASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 ACTL9-202ENST00000612068 1252 ntBASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 KRT18P28-201ENST00000453838 1332 ntBASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLGALT2Q8IYK4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 FAM58CP-201ENST00000435741 640 ntBASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COLGALT2Q8IYK4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
COLGALT2Q8IYK4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 CNN2P11-201ENST00000429351 262 ntBASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLGALT2Q8IYK4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.44■□□□□ 0.54
COLGALT2Q8IYK4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms