Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 AC023511.2-201ENST00000618803 211 ntBASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 LYSMD4-203ENST00000378904 2122 ntBASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SCN4BQ8IWT1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 PTCHD3P3-201ENST00000403073 906 ntBASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 KRT18P3-201ENST00000451602 1288 ntBASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 FAM197Y3-203ENST00000618346 717 ntBASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN4BQ8IWT1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 AC134043.2-201ENST00000624206 2238 ntBASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 AL591424.1-201ENST00000442569 1213 ntBASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 AC108073.2-201ENST00000464002 357 ntBASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 MIR4751-201ENST00000578027 74 ntBASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 AC133963.1-201ENST00000504166 1679 ntBASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN4BQ8IWT1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN4BQ8IWT1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN4BQ8IWT1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN4BQ8IWT1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.27■□□□□ 0.51
SCN4BQ8IWT1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN4BQ8IWT1 GPR89P-201ENST00000407924 1495 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms