Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.34■□□□□ 0.37
LDB1Q86U70 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 AC099398.1-201ENST00000567919 2776 ntBASIC17.34■□□□□ 0.37
LDB1Q86U70 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
LDB1Q86U70 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LDB1Q86U70 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.33■□□□□ 0.37
LDB1Q86U70 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LDB1Q86U70 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LDB1Q86U70 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDB1Q86U70 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDB1Q86U70 AC092053.1-201ENST00000605787 1936 ntBASIC17.33■□□□□ 0.37
LDB1Q86U70 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDB1Q86U70 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LDB1Q86U70 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LDB1Q86U70 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
LDB1Q86U70 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
LDB1Q86U70 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LDB1Q86U70 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
LDB1Q86U70 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.33■□□□□ 0.36
LDB1Q86U70 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.33■□□□□ 0.36
LDB1Q86U70 HCG4P8-203ENST00000443049 980 ntBASIC17.33■□□□□ 0.36
LDB1Q86U70 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.33■□□□□ 0.36
LDB1Q86U70 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.33■□□□□ 0.36
LDB1Q86U70 FOSL1P1-201ENST00000511041 816 ntBASIC17.33■□□□□ 0.36
LDB1Q86U70 STK19B-204ENST00000512515 211 ntBASIC17.33■□□□□ 0.36
LDB1Q86U70 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.33■□□□□ 0.36
LDB1Q86U70 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.33■□□□□ 0.36
LDB1Q86U70 MIR5100-201ENST00000579544 119 ntBASIC17.33■□□□□ 0.36
LDB1Q86U70 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
LDB1Q86U70 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.33■□□□□ 0.36
LDB1Q86U70 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.33■□□□□ 0.36
LDB1Q86U70 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.33■□□□□ 0.36
LDB1Q86U70 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LDB1Q86U70 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.33■□□□□ 0.36
LDB1Q86U70 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LDB1Q86U70 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.33■□□□□ 0.36
LDB1Q86U70 AC093525.9-201ENST00000624961 1746 ntBASIC17.33■□□□□ 0.36
LDB1Q86U70 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
LDB1Q86U70 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 AC009336.1-201ENST00000608941 1553 ntBASIC17.32■□□□□ 0.36
LDB1Q86U70 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LDB1Q86U70 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.32■□□□□ 0.36
LDB1Q86U70 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LDB1Q86U70 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LDB1Q86U70 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.32■□□□□ 0.36
LDB1Q86U70 POM121L3P-201ENST00000419331 1163 ntBASIC17.32■□□□□ 0.36
LDB1Q86U70 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LDB1Q86U70 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.32■□□□□ 0.36
LDB1Q86U70 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.32■□□□□ 0.36
LDB1Q86U70 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.32■□□□□ 0.36
LDB1Q86U70 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.32■□□□□ 0.36
LDB1Q86U70 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LDB1Q86U70 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.32■□□□□ 0.36
LDB1Q86U70 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LDB1Q86U70 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 AL135999.2-201ENST00000622438 1686 ntBASIC17.32■□□□□ 0.36
LDB1Q86U70 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.32■□□□□ 0.36
LDB1Q86U70 AC148477.5-201ENST00000625164 1645 ntBASIC17.32■□□□□ 0.36
LDB1Q86U70 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LDB1Q86U70 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.32■□□□□ 0.36
LDB1Q86U70 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
LDB1Q86U70 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms