Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBE3BQ7Z3V4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 AC067852.2-201ENST00000590513 2313 ntBASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 MCCD1P2-201ENST00000423228 335 ntBASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.55■■□□□ 1.04
UBE3BQ7Z3V4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 SLC25A6P2-201ENST00000497974 877 ntBASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 AC096734.2-201ENST00000562054 433 ntBASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 MTDHP5-201ENST00000598980 586 ntBASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 AL691403.2-201ENST00000618460 490 ntBASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 AC004877.2-201ENST00000623941 599 ntBASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.54■■□□□ 1.04
UBE3BQ7Z3V4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 AC087163.2-201ENST00000457299 853 ntBASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 MIR3687-2-201ENST00000577708 61 ntBASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 MIR3687-1-201ENST00000614492 61 ntBASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 AC068880.1-201ENST00000507289 2297 ntBASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 NOC2LP2-201ENST00000407594 1944 ntBASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.53■■□□□ 1.04
UBE3BQ7Z3V4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 RHOQP3-201ENST00000437982 621 ntBASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 ALG1L5P-201ENST00000482043 771 ntBASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.52■■□□□ 1.04
UBE3BQ7Z3V4 BCAR1-209ENST00000546196 1340 ntBASIC21.52■■□□□ 1.03
UBE3BQ7Z3V4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
UBE3BQ7Z3V4 GNAS-203ENST00000306120 1878 ntBASIC21.52■■□□□ 1.03
UBE3BQ7Z3V4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBE3BQ7Z3V4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
UBE3BQ7Z3V4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms